PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 304aa    MW: 32431.1 Da    PI: 10.5479
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075030.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP131.58e-41872323119
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 
                     ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  ++s +ss  + s++        
  XP_011075030.1  87 AAKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSRTTISAPpsksaplf 181
                     5799****************************************************************999866666666664444455566777 PP

             TCP  89 ....................kaaksaakskksqksaasalnlakesrakar 119
                                          + ++++ +k++ + +++ +  a   r++ar
  XP_011075030.1 182 vggapsmlgfphqltsianfGQDPDENYTKRRFRGDTTSSTSATPGRNSAR 232
                     777777777777776666663333333333333333333333333443333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.3E-3892236IPR005333Transcription factor, TCP
PROSITE profilePS5136928.70592146IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MQFMELPAQK QGNSSNSGHH EAASSLQLLS PHRYHQSQEP GSGSGLAPPN GPFMGSISAQ  60
QSRNLDVSSS SSTPTTANRN DSVTNKAAKK PSKDRHTKVD GRGRRIRMPA LCAARVFQLT  120
RELGHKSDGE TIEWLLQQAE PAIIAATGTG TIPANFSTLN VSLRSSRTTI SAPPSKSAPL  180
FVGGAPSMLG FPHQLTSIAN FGQDPDENYT KRRFRGDTTS STSATPGRNS ARDQEQGSDT  240
KPALFQASSY IPAPPIWAVA PAAASIGNAF WMLPVSGGAG HTVEDVLQLH AENRRFRVFW  300
SGSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075030.10.0PREDICTED: transcription factor TCP23-like
SwissprotQ9C5182e-61TCP8_ARATH; Transcription factor TCP8
TrEMBLA0A022Q8E51e-108A0A022Q8E5_ERYGU; Uncharacterized protein
STRINGSolyc11g020670.1.11e-105(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.14e-57TCP family protein